# Bioinformatics

PyMOL - MCP is a tool that integrates PyMOL with Claude AI through the Model Context Protocol (MCP), enabling control of molecular visualization and structural analysis through natural language.

An experimental nf-core tools MCP project that provides functions such as pipeline creation and module management

The UniProt MCP Server is a service that provides protein information queries. It supports obtaining protein names, functional descriptions, sequences, etc. through UniProt numbers, and also supports batch queries and caching functions.

The UniProt MCP Server is a service that provides protein information queries, supporting the retrieval of protein function and sequence information through UniProt numbers.

Bioconda-MCP-Server is a bioinformatics tool management platform based on Bioconda, providing MCP (possibly referring to a microservice control platform or similar functionality) services.

The Bio-OS MCP Server is a tool and prompt server based on the model context protocol, providing workflow management and Docker image building functions for Bio-OS, supporting both local and cloud deployment methods.

The UniProt MCP Server is a service that provides protein information query for language models. It supports searching for proteins, obtaining detailed information, sequences, functional annotations, and structural data from the UniProt database, and can be integrated into AI applications such as Claude Desktop.

Scanpy MCP is a natural language processing server designed for the single-cell RNA sequencing analysis software Scanpy, supporting operations such as data reading and writing, preprocessing, analysis, and visualization through natural language. It is suitable for researchers and proxy developers.

SCMCP is an MCP server for single-cell RNA sequencing analysis through natural language processing

This project is an MCP server that provides a programmatic interface for the GWAS Catalog REST API, supporting access to GWAS study, variant, trait, and association data and automatically processing large-scale result sets.

This project is an MCP service interface based on the Broad Institute's Liftover tool, providing genome coordinate conversion functions and supporting the conversion of single point, interval, variant, and HGVS formats.

MCP server for bioinformaticians and computational biologists

A UniProt protein information query server based on the Model Context Protocol (MCP), providing services for obtaining protein functions, sequences, and other information. It supports single and batch queries and has caching and error - handling functions.

SAMtools MCP provides a standardized operation interface for SAM/BAM/CRAM files, supporting core functions such as format conversion, sorting, and statistics.