AIBase
EN
Explore
Pubmed Search MCP Server
P

Pubmed Search MCP Server

A PubMed academic paper search service based on the Model Content Protocol
Search toolsResearch and data#Academic Search#Literature Retrieval#PubMed#MCP Service.Python
2.5 points
8.3K
Open Site

Overview

Content Details

Alternatives

What is the PubMed Search MCP Server?

The PubMed Search MCP Server is a tool based on the Model Context Protocol (MCP) that allows users to search for academic papers in the PubMed database by keywords. It supports retrieval by title, abstract, or author and returns detailed paper information such as title, author, journal, abstract, DOI, etc.

How to use the PubMed Search MCP Server?

You can start the server through simple command - line operations and then integrate the service into the Claude Desktop application. It supports quickly searching for papers by keywords and obtaining detailed results.

Applicable scenarios

It is suitable for researchers, students, and anyone who needs to efficiently retrieve PubMed literature. For example, finding the latest research progress in a specific field or obtaining relevant materials on a certain topic.

Main Features

Keyword Search
Supports precise search by title, abstract, or author name.
Paper Details Retrieval
Returns comprehensive information about the paper, including title, author, journal, abstract, DOI, etc.
Batch Operation
Supports retrieving multiple papers at once to improve efficiency.
Advantages
Quick access to the massive PubMed database
Supports multiple retrieval methods (keywords, DOI)
User - friendly interface and easy to integrate into existing systems
Limitations
Requires an internet connection to run
May take some time to process very large queries

How to Use

Install Dependencies
Ensure that the Python environment and the required dependency packages (fastmcp, requests, python - dotenv) are installed.
Create a Configuration File
Create a `.env` file to store API keys or other sensitive information.
Start the Server
Run the MCP server in development mode.
Add to Claude Desktop
Add the server to the Claude Desktop configuration file.

Usage Examples

Case 1: Search for Literature on Cancer Treatment
After the user enters the keyword 'cancer treatment', the system returns the latest research results related to cancer treatment.
Case 2: Retrieve Paper Details by DOI
When the user enters a specified DOI value, the server returns the complete information of the paper.

Frequently Asked Questions

How to install the PubMed Search MCP Server?
Does it support batch queries?
What should I do if I encounter network problems?

Related Resources

GitHub Repository
Project source code and documentation
Smithery Official Website
Learn more about the Model Context Protocol
PubMed Official Documentation
Learn in - depth how to use the PubMed API

Installation

Copy the following command to your Client for configuration
Note: Your key is sensitive information, do not share it with anyone.

Alternatives

A
Airweave
Airweave is an open - source context retrieval layer for AI agents and RAG systems. It connects and synchronizes data from various applications, tools, and databases, and provides relevant, real - time, multi - source contextual information to AI agents through a unified search interface.
Python
7.1K
5 points
F
Finlab Ai
FinLab AI is a quantitative financial analysis platform that helps users discover excess returns (alpha) in investment strategies through AI technology. It provides a rich dataset, backtesting framework, and strategy examples, supporting automated installation and integration into mainstream AI programming assistants.
6.5K
4 points
B
Better Icons
An MCP server and CLI tool that provides search and retrieval of over 200,000 icons, supports more than 150 icon libraries, and helps AI assistants and developers quickly obtain and use icons.
TypeScript
6.7K
4.5 points
A
Apify MCP Server
The Apify MCP Server is a tool based on the Model Context Protocol (MCP) that allows AI assistants to extract data from websites such as social media, search engines, and e-commerce through thousands of ready-to-use crawlers, scrapers, and automation tools (Apify Actors). It supports OAuth and Skyfire proxy payment and can be integrated into MCP clients such as Claude and VS Code through HTTPS endpoints or local stdio.
TypeScript
6.5K
5 points
P
Praisonai
PraisonAI is a production-ready multi-AI agent framework with self-reflection capabilities, designed to create AI agents to automate the solution of various problems from simple tasks to complex challenges. It simplifies the construction and management of multi-agent LLM systems by integrating PraisonAI agents, AG2, and CrewAI into a low-code solution, emphasizing simplicity, customization, and effective human-machine collaboration.
Python
10.4K
5 points
H
Haiku.rag
Haiku RAG is an intelligent retrieval - augmented generation system built on LanceDB, Pydantic AI, and Docling. It supports hybrid search, re - ranking, Q&A agents, multi - agent research processes, and provides local - first document processing and MCP server integration.
Python
10.2K
5 points
C
Claude Context
Claude Context is an MCP plugin that provides in - depth context of the entire codebase for AI programming assistants through semantic code search. It supports multiple embedding models and vector databases to achieve efficient code retrieval.
TypeScript
17.5K
5 points
M
Maverick MCP
MaverickMCP is a personal stock analysis server based on FastMCP 2.0, providing professional level financial data analysis, technical indicator calculation, and investment portfolio optimization tools for MCP clients such as Claude Desktop. It comes pre-set with 520 S&P 500 stock data, supports multiple technical analysis strategies and parallel processing, and can run locally without complex authentication.
Python
11.1K
4 points
G
Gitlab MCP Server
Certified
The GitLab MCP server is a project based on the Model Context Protocol that provides a comprehensive toolset for interacting with GitLab accounts, including code review, merge request management, CI/CD configuration, and other functions.
TypeScript
24.4K
4.3 points
N
Notion Api MCP
Certified
A Python-based MCP Server that provides advanced to-do list management and content organization functions through the Notion API, enabling seamless integration between AI models and Notion.
Python
20.4K
4.5 points
D
Duckduckgo MCP Server
Certified
The DuckDuckGo Search MCP Server provides web search and content scraping services for LLMs such as Claude.
Python
71.8K
4.3 points
M
Markdownify MCP
Markdownify is a multi-functional file conversion service that supports converting multiple formats such as PDFs, images, audio, and web page content into Markdown format.
TypeScript
34.3K
5 points
U
Unity
Certified
UnityMCP is a Unity editor plugin that implements the Model Context Protocol (MCP), providing seamless integration between Unity and AI assistants, including real - time state monitoring, remote command execution, and log functions.
C#
31.1K
5 points
F
Figma Context MCP
Framelink Figma MCP Server is a server that provides access to Figma design data for AI programming tools (such as Cursor). By simplifying the Figma API response, it helps AI more accurately achieve one - click conversion from design to code.
TypeScript
65.4K
4.5 points
G
Gmail MCP Server
A Gmail automatic authentication MCP server designed for Claude Desktop, supporting Gmail management through natural language interaction, including complete functions such as sending emails, label management, and batch operations.
TypeScript
21.0K
4.5 points
C
Context7
Context7 MCP is a service that provides real-time, version-specific documentation and code examples for AI programming assistants. It is directly integrated into prompts through the Model Context Protocol to solve the problem of LLMs using outdated information.
TypeScript
96.8K
4.7 points
AIBase
Zhiqi Future, Your AI Solution Think Tank
English简体中文繁體中文にほんご
© 2026AIBase