MCP Server BioRxiv
M

MCP Server BioRxiv

The medRxiv MCP Server is a bridge tool connecting AI assistants and the medRxiv preprint library, enabling functions such as searching for preprints, retrieving metadata, and accessing content in the field of health science through the Model Context Protocol (MCP). It supports local storage and paper analysis prompts.
2 points
4.5K

What is the medRxiv MCP Server?

This is a service tool specifically designed for AI assistants, connecting to the medRxiv preprint database through the Model Context Protocol (MCP) interface. It allows non - technical users to search for and read the latest medical research papers through natural language instructions, supporting literature research and analysis in the field of health science.

How to use the medRxiv MCP Server?

Simply install this service in a supported AI assistant (such as Claude Desktop), and you can query papers through natural language. The system will automatically handle the complex retrieval process and return the results in an easy - to - read format.

Use cases

Suitable for medical researchers to quickly understand the latest developments in the field, students to find references, clinicians to track cutting - edge treatment plans, and any scenario that requires systematic analysis of medical literature.

Main features

Intelligent paper search
Supports querying the medRxiv database using natural language and advanced retrieval syntax, and can filter conditions such as time range and author.
Metadata retrieval
Automatically extracts structured information such as paper titles, authors, and abstracts for quick browsing.
Local cache system
Automatically saves recently accessed papers to reduce repeated download time.
Intelligent analysis templates
Built - in professional paper analysis processes automatically generate research summaries and key point analyses.
Advantages
Access professional medical literature without programming knowledge
The retrieval speed is more than 10 times faster than manual operation
Support mixed Chinese - English queries
Automatically save historical records for easy backtracking
Limitations
Only includes medRxiv preprints, not formal journals
Full - text downloads may be missing for some old papers
The core functions require an internet connection

How to use

Install the service
Install with one - click through Smithery or manually configure the operating environment.
Configure the AI assistant
Add MCP server settings to the Claude Desktop configuration file.
Start querying
After restarting the AI assistant, you can search for papers using natural language.

Usage examples

Search for research on a specific disease
A clinician needs to understand the latest treatment progress for Parkinson's disease.
In - depth analysis of a single paper
A graduate student needs to systematically review a specific paper.

Frequently Asked Questions

Do I need to pay for a medRxiv subscription?
How do the search results differ from those on the official website?
Does it support exporting in reference format?

Related resources

medRxiv official website
The official website of the preprint database
GitHub repository
Project source code and update logs
MCP protocol description
Model Context Protocol technical specification

Installation

Copy the following command to your Client for configuration
{
  "mcpServers": {
    "biorxiv": {
      "command": "python",
      "args": ["-m", "medrxiv-mcp-server"]
      }
  }
}

{
  "mcpServers": {
    "biorxiv": {
      "command": "C:\\Users\\YOUR_USERNAME\\AppData\\Local\\Programs\\Python\\Python311\\python.exe",
      "args": [
        "-m",
        "medrxiv-mcp-server"
      ]
    }
  }
}

{
  "mcpServers": {
    "medrxiv": {
      "command": "bash",
      "args": [
        "-c",
        "source /home/YOUR/PATH/mcp-server-bioRxiv/.venv/bin/activate && python /home/YOUR/PATH/mcp-server-bioRxiv/medrxiv_server.py"
      ],
      "env": {},
      "disabled": false,
      "autoApprove": []
    }
  }
}
Note: Your key is sensitive information, do not share it with anyone.

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