Primekg MCP

🚀 PrimeKG to Neo4j

This project imports Precision Medicine Knowledge Graph (PrimeKG) data into the Neo4j database for data analysis and exploration.

🚀 Quick Start

This project focuses on importing data from the Precision Medicine Knowledge Graph (PrimeKG) into the Neo4j database, facilitating data analysis and exploration.

✨ Features

• PrimeKG is a comprehensive biomedical knowledge graph that integrates 20 high - quality biomedical resources. It describes 17,080 diseases and their over 4 million relationships, covering ten major biological scales.
• The project undertakes the following tasks:
  1. Downloads and processes PrimeKG data.
  2. Imports the data into the Neo4j graph database.
  3. Provides tools for querying and analyzing the data.

📚 Documentation

Project Structure

primekg-mcp/
├── config/           # Configuration files
├── data/             # Data files (PrimeKG data will be stored here)
├── docs/             # Documentation
├── scripts/          # Utility scripts for data processing
├── src/              # Source code
│   ├── db/           # Database connection and queries
│   ├── etl/          # Data extraction, transformation, and loading
│   └── utils/        # Utility functions
└── tests/            # Test files

Setup Instructions

(Setup instructions will be added as the project progresses.)

Usage Instructions

(Usage instructions will be added as the project progresses.)

License Information

(License information will be added later.)