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Jackkuo666 Biorxiv MCP Server
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Jackkuo666 Biorxiv MCP Server

The bioRxiv MCP Server is a bridge connecting AI assistants to the bioRxiv preprint library, enabling the search for biological preprints and access to metadata through the MCP protocol.
Research and dataSearch tools#Paper Search#Biological Research#Metadata#Scientific Research Tool.Python
2 points
9.1K
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Overview

Installation

Content Details

Alternatives

What is the bioRxiv MCP Server?

The bioRxiv MCP Server is a tool based on the Model Context Protocol (MCP) for connecting AI assistants to the bioRxiv preprint platform. It allows users to efficiently search for and obtain the latest research results in the field of biology.

How to use the bioRxiv MCP Server?

You can start using it in just a few steps. First, install the necessary dependencies, then start the server. Next, you can enter keywords or advanced queries to find papers of interest.

Applicable Scenarios

This tool is very suitable for researchers and scholars who need to quickly retrieve the latest research progress in the field of biological sciences.

Main Features

Paper Search
Supports precise search by keywords or advanced parameters.
Metadata Analysis
Can obtain detailed metadata information for each paper.
Paper Download
Supports direct download and reading of papers of interest.
Research Prompt Generation
Provides a series of professional prompts specifically for paper analysis.
Advantages
Efficient Search: Quickly find the required research results.
Multilingual Support: Compatible with query requests in multiple languages.
Local Storage: Saves network bandwidth and improves access speed.
Limitations
Requires a Python Environment: Must install Python 3.10+ to run.
API Limitations: Some advanced functions may be limited by the API call frequency.

How to Use

Install Dependencies
Clone the repository and install the required Python packages.
Start the Server
Run the main script to start the MCP server.
Execute a Query
Send a query request to the server to obtain results.

Usage Examples

Case 1: Search for the Latest Research
Query recent preprints on neuroscience.
Case 2: Get Paper Details
Obtain detailed information about a paper with a DOI of 10.1101/123456.

Frequently Asked Questions

How to install the bioRxiv MCP Server?
Can this tool be used offline?
Which operating systems are supported?

Related Resources

GitHub Repository
Project source code and documentation.
Official Documentation
Detailed usage guides and technical documentation.
bioRxiv Homepage
The official website of the bioRxiv preprint platform.

Installation

Copy the following command to your Client for configuration
{
  "mcpServers": {
    "biorxiv": {
      "command": "python",
      "args": ["-m", "biorxiv-mcp-server"]
      }
  }
}

{
  "mcpServers": {
    "biorxiv": {
      "command": "C:\\Users\\YOUR_USERNAME\\AppData\\Local\\Programs\\Python\\Python311\\python.exe",
      "args": [
        "-m",
        "biorxiv-mcp-server"
      ]
    }
  }
}

{
  "mcpServers": {
    "biorxiv": {
      "command": "bash",
      "args": [
        "-c",
        "source /home/YOUR/PATH/mcp-server-bioRxiv/.venv/bin/activate && python /home/YOUR/PATH/mcp-server-bioRxiv/biorxiv_server.py"
      ],
      "env": {},
      "disabled": false,
      "autoApprove": []
    }
  }
}
Note: Your key is sensitive information, do not share it with anyone.

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